Fungal Ecology
○ Elsevier BV
Preprints posted in the last 90 days, ranked by how well they match Fungal Ecology's content profile, based on 12 papers previously published here. The average preprint has a 0.01% match score for this journal, so anything above that is already an above-average fit.
Song, J.; Yan, Z.; Perez-Moreno, J.; Zhang, F.; Xie, T.; Su, L.; Liu, J.; Wang, Y.; Liu, D.; Shi, X.; Yang, Z.; Yang, C.; Liu, W.; Shi, X.; Wan, S.; Cheewangkoon, R.; Dai, D.; Senanayake, I. C.; Yu, F.
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During mycological surveys in Yunnan Province, China, specimens of a fungus producing massive, upright stromata up to 50 cm high and individually 2.2 Kg in weight were sampled. Through an integrative taxonomic approach combining detailed morphology, multilocus phylogeny (ITS, LSU, RPB2, TUB2), and phylogenomic analyses, this fungus is proposed as the new species Dianjunus rex gen. et sp. nov., the type of the new family Dianjunaceae (Xylariales). Phylogenetic analyses robustly place Dianjunaceae as a distinct sister clade to Graphostromataceae. Divergence time estimation dates the origin of this family to the early Paleocene (~65 Mya), coinciding with the post-K-Pg extinction period, when an estimated 75% of all plant and animal species went extinct, and a significant ecological reorganization of life on earth happened. The stromata of D. rex represent the largest fructifications documented within the Ascomycota, significantly expanding the known morphological range of the Xylariales. The study provides a comprehensive description, including a nodulisporium-like anamorph with periconiella-like branching patterns, and discusses the taxon's phylogenetic placement, and distinctive morphology. This discovery highlights the unexplored fungal diversity in East Asian forests.
Masoudi, A.; Valdiviezo, M. J.; Tirmizi, E.; Joseph, R. A.; Keyhani, N. O.
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Fungal-animal mutualisms remain significantly understudied, yet they represent some of the most successful partnerships known in nature. Fungal farming ambrosia beetles cultivate a consortium of fungal partners that include obligate filamentous members and yeasts. These fungi are maintained in highly specialized insect organs, termed mycangia, and are cultivated as food along the beetle galleries elaborated within host trees. Here we identify two previously described filamentous species, Raffaelea arxii and R. fusca, and the yeast, Ambrosiozyma monospora, as well as two new filamentous fungal species, Neocosmospora affinis and Graphium ambrosium, and two novel yeasts, designated Alloascoidea xylebori and Wickerhamomyces ambrosius, from beetle gallery walls and ambrosia beetle mycangia, using a protocol that minimizes biases in recovery by removal of a commonly used ethanol wash. To meet Koch-like postulates, we further demonstrate that all seven fungal species were individually competent at colonizing aposymbiotic X. affinis mycangia, thus demonstrating each as a viable mycangial mutualist. These data highlight methodological considerations that overcome previous limitations in mycangial content characterization, resulting in the discovery of new ambrosia beetle fungal partners. We further validate the fungal-animal mutualism by demonstrating specific colonization of the mycangial organ by potential fungal partners.
Ododa, K. O.; Odor, P.; Kovacs, B.; Tinya, F.; Aszalos, R.; Leal, C. M.; Geiger, A.; Molnar, A.; Geml, J.
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Ectomycorrhizal (ECM) fungi are well-known for their crucial roles in forest health and productivity, yet their responses to various forest management practices are understudied, particularly in oak-dominated forests. The purpose of this study was to better understand the effects of silvicultural treatments on the diversity and community composition of ECM fungi in an oak-hornbeam forest in northern Hungary. We analyzed ITS2 rDNA metabarcoding data of soil-borne fungi to compare richness and community composition of ECM fungi among forest treatment types (clear-cutting, gap-cutting, preparation-cutting, tree retention in clear-cut areas, and control) and between sampling years (2020 and 2021). We found 268 ECM fungal genotypes, with the most diverse phylogenetic clades being /russula-lactarius (52), /tomentella-thelephora (47), /inocybe (40), /sebacina (27), and /cortinarius (20). We found significant compositional difference of ECM fungi among silvicultural treatments in both years, with some variations in richness. There were also small, but still significant compositional differences between the two years. Treatment effect was partly explained by altered environmental variables, such as relative humidity and soil temperature. These results highlight the importance of forest structure and the abiotic environment in driving community dynamics of plant-symbiotic fungi, with potential implications for forest health and productivity.
Sanchez-Hernandez, D.; Ibarra-Juarez, L. A.; Larsen, J.; Reverchon, F.
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BACKGROUNDEndophytic fungi are naturally inhabiting plant organs without causing disease symptoms. They can also contribute to their hosts pest and disease resistance by displaying entomopathogenic and/or antifungal traits. In this study, we evaluated the ability of 11 strains of avocado fungal endophytes to antagonize three important avocado plant pathogens: Colletotrichum gloeosporioides, Fusarium solani, and Phytophthora cinnamomi, and two insect pests: Sitophilus zeamais and Xyleborus bispinatus. RESULTSThe results show that Trichoderma spp. strains were the most effective against the evaluated plant pathogens in terms of growth inhibition, in direct contact assays or through metabolite production. Other fungi, such as Purpureocillium sp. and Pochonia sp., only exhibited pathogen inhibition through diffusible metabolites but displayed strong insecticidal capacity against the evaluated pests, hence being identified as promising multi-target biocontrol agents in the integrative analysis. CONCLUSIONOur findings evidence the potential of avocado fungal endophytes and their metabolites as multi-target biocontrol agents of crop pests and pathogens.
Medina, N.; Patrick, K.; Nikitin, T.; Kaliski, C.; Bogle, A.; Lo, M.; Kennedy, P. G.; McCormack, M. L.
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Ectomycorrhizal (EcM) fungi are well-recognized symbionts impacting tree health and ecosystem functioning globally, yet understanding of their timing of proliferation in soils across seasons and years remains limited. We analyzed monthly patterns of EcM fungal abundance and community structure over two years in five temperate monodominant forest plots via quantitative PCR and Illumina sequencing. We found that the phenological dynamics of EcM fungi differed significantly by host tree leaf habit, fungal exploration type, fungal genus, and soil moisture. Overall, total EcM fungal abundances based on qPCR consistently peaked in autumn, and were more dynamic in evergreen than deciduous plots, supporting ideas of surplus carbon and asymmetric above-belowground dynamics. Longer-distance exploration types peaked earlier and were more stable than shorter-distance types, suggesting an independent and supportive role in releasing spring nutrients. About half of 20 focal taxa consistently peaked in either autumn, summer, or spring, while others were either host- and/or year-dependent. Our findings highlight that phenology is a key EcM fungal trait best explained by both host and fungal contributions, and future studies across biomes should consider seasonal shifts and sampling to elucidate phenological traits. Summary- The timing of belowground production and seasonal community dynamics remain poorly understood for ectomycorrhizal (EcM) fungi. - We collected soils monthly for two years from five temperate monodominant forest plots. - Fungal production peaked in autumn, shorter-distance and evergreen-associated spanned wider ranges, and half of focal fungal genera showed seasonal preference, emphasizing autumn surplus carbon and spring nutrients from long-distance types. - Future studies should consider seasonal shifts when sampling EcM fungal communities, and forest carbon models should include asymmetric above-belowground phenology. Translated Summary (Spanish)- La fenologia de la produccion y composicion de comunidades de hongos ectomicorrizicos (EcM) es poco estudiada. - Recolectamos suelos mensualmente por dos anos de cinco parcelas mono-dominantes templados. - Produccion maxima de hongos ocurrio en otono, hongos asociados con arboles siempreverdes y de exploracion de corta-distancia observaron rangos mas amplios, y la mitad de generos de hongos focales observaron preferencia estacional, enfatizando extra carbono en otono y nutrientes en primavera de tipos larga-distancia. - Estudios deben considerar cambios estacionales para el muestreo de hongos EcM, y modelos de carbono deben incluir fenologia asimetrica entre hojas y hongos. Plain language summaryEctomycorrhizal fungi are critical for the global carbon cycle, but their seasonal and inter-annual growth patterns remain unclear. We sample soil DNA monthly over two years across five different monodominant temperate forest stands. We find an overall belowground peak in autumn, with significantly later growth under wetter conditions, more dynamism with evergreen trees, and distinct spring growth by longer-distance fungi.
Moses, D.; Diaz-Matamoros, P.; Mennen, L.; Carneal, L.; Avila, K.; Quesada-Ocampo, L.; Carter, M. E.
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Fungal plant pathogens can be affected by the bacteria they interact with in their environment, yet the characterization of these interactions beyond direct antagonism is lacking, especially in the case of endohyphal bacteria (EHB). Though limited in characterized examples, EHB can alter disease severity of their fungal host, providing either a potential tool or target for control. We screened isolates of Fusarium oxysporum f. sp. niveum (FON), an important soil-borne watermelon pathogen, using 16S PCR and fluorescence in situ hybridization microscopy to identify novel EHB. A symbiont of FON AS124 was identified to be a Paenibacillus sp. through genome sequencing and average nucleotide identity. To begin characterizing this relationship, we conducted watermelon infection assays using FON cured of its symbiont, the native association, and a coinoculation of fungi and bacteria. Disease severity was reduced in watermelon seedlings inoculated with the native association, though not in the coinoculation, and Paenibacillus sp. CB74 did not alone promote plant growth or inhibit fungal growth. This study shows an important functional outcome, reduced disease, for a novel symbiosis between FON and Paenibacillus sp. CB74, setting up further investigation into the mechanisms behind this outcome and the application of this interaction. ImportanceFungi pose a challenge in both the field and hospital as antifungal resistance rises and chemical control is increasingly scrutinized. In plant pathogenic fungi, endohyphal bacteria may present alternative targets or mechanisms of fungal control. These relationships are observed across diverse groups of fungi and bacteria, though few have been studied to the point of understanding impact. To contribute to the small but growing catalog of known endofungal bacterial relationships, we identified a novel symbiosis and began characterizing its functional outcomes with plant infection assays. The identified bacterial symbiont does alter disease severity of the fungal host offering a new system for both application and study of fungal pathogenesis.
Chowdhury, J.; Milne, N.; Wade, M.; Thuaux, B.; Green, P.; Last, I.; Senior, J.; Carnegie, A. J.; Anderson, I. C.; Turnbull, T.; Plett, K. L.; Plett, J. M.
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Early management decisions in operational forestry are critical for plantation success because it strongly influences seedling quality at planting. Beyond shaping seedling morphology, nursery inputs can also restructure root-associated fungal communities which has consequences for nutrient acquisition, stress tolerance and disease suppression after planting. In this study, we altered nutrient and fungicide inputs based on mycorrhizal ecological theory and quantified the effects of these treatments on key dimensions of the growth performance of radiata pine seedlings. In parallel, we profiled the root-associated mycobiome, assigning fungal taxa to functional guilds and summarizing their richness, diversity, relative abundance and community structure. Using a composite performance index that integrates the key morphological and health measures into a single response variable, together with conventional statistical models with machine learning approaches, we identified management practises that promote both plant performance and a favourable root fungal community and determined the consistent microbiome changes linked to overall quality of the seedlings. These results suggest that microbial feedback loops occur even in highly managed nursery conditions. More broadly, by combining a composite performance index with predictive modelling, we provide a practical way to test complex management combinations and identify microbiome features associated with high-quality planting stock.
Bouchard, A.; Darino, M. A.; Cailleau, G.; Narayanan, A.; Cravero, M.; Kennedy, P.; Hanson, B. T.; Robinson, A. J.; Kelliher, J.; Hammond-Kosack, K. E.; Chain, P.; Bindschedler, S.; Junier, P.
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In heterogeneous environments, the hyphae of filamentous fungi and oomycetes can facilitate the dispersal of other microorganisms. The use of these "fungal highways" (FH) is regulated by both physical and biological factors with their interplay resulting in variable capabilities of different microbes to establish FH. Several devices have been developed to test the movement of bacteria across mycelium. However, these methods are usually time-consuming and cannot be applied either at a large scale or in a high throughput format. In this study, we developed 3D-printed experimental devices that physically separate two environments while allowing hyphal networks to act as bridges for bacterial movement. The final design allows for the simultaneous testing of up to 10 pairs and the inclusion of any culturing media. With these devices, we investigated how fungal-bacterial pairing, nutrient conditions, and inoculation strategies influence FH formation. Bacterial transport was limited in nutrient-rich media but increased under poorer nutrient conditions, consistent with enhanced exploratory growth of the mycelium. Both cis- and trans-inoculation supported FH formation, although bacterial arrival was delayed in the absence of co-inoculation. The devices were used to demonstrate that transport of bacteria by FH was relevant for the colonization of a natural substrate. Finally, we established a novel in planta assay to evaluate FH formation during host colonization. This assay demonstrated that Fusarium graminearum can transport bacteria during wheat spike colonization. Together, these results provide accessible, scalable tools to study hyphal-mediated bacterial dispersal and highlight the combined role of biological specificity and nutrient context in the establishment of FH. Graphical abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=75 SRC="FIGDIR/small/719220v1_ufig1.gif" ALT="Figure 1"> View larger version (25K): org.highwire.dtl.DTLVardef@1cf39aforg.highwire.dtl.DTLVardef@1d41e6corg.highwire.dtl.DTLVardef@1196637org.highwire.dtl.DTLVardef@85cc6c_HPS_FORMAT_FIGEXP M_FIG C_FIG
Boren, A.; Weber, S.; Keith, L. M.; Gillespie, R.; Roderick, G.; Roy, K.
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Invasive ambrosia beetles and fungal pathogens threaten forest ecosystems worldwide, exemplified in Hawaii by the widespread loss of keystone species [o]hia (Metrosideros polymorpha), due to Rapid [O]hia Death (ROD). A unique occurrence of five ambrosia beetle species (one native, four introduced) that vary in their symbiotic relationships with two introduced fungal pathogens provide an opportunity to test hypotheses of how opportunistic symbioses facilitate disease dynamics involving dominant forest trees. ROD is caused by two novel Ceratocystis fungal pathogens whose spores can spread via association with ambrosia beetles as they bore into [o]hia trees. We examined beetle-pathogen interactions of all five ambrosia beetle species in three ROD-affected regions on Hawaii Island, and used quantitative PCR (qPCR) to provide the first molecular confirmation of the two ROD pathogens associated with the exterior, mycangia, and gut of each beetle species. Results from generalized linear models and correlation networks show that pathogen acquisition and transport, including the potential for consumption and the presence of the pathogens, are determined by beetle invasion status and mycangia morphology. A niche construction framework suggests that both varying symbioses and opportunism facilitate disease spread, with the three invasive Xyleborus species emerging as key disease vectors. Identifying the beetle species that are more likely to contribute to disease spread, and understanding their biology as vectors, can inform targeted conservation strategies for [o]hia and for insect-pathogen threats in forests worldwide, and illustrates the potential ecosystem-level impacts of novel and opportunistic symbioses between globally distributed invasive vectors and pathogens.
Mizell, R. F.
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Xylosandrus crassiusculus (Motschulsky), the granulate ambrosia beetle, was one of the first highly-destructive ambrosia beetles introduced into the southern U.S in the 1970s where it was found in South Carolina (Kovach 1986). The Redbay ambrosia beetle, Xyleborus glabratus Eichhoff, was first detected in the U.S. in South Georgia in 2002. This beetle and its associated fungi, the laurel wilt fungus Raffaelea laurelensis and others have caused substantial destruction to native redbay (Persea borbonia) in GA, SC, FL and elsewhere. This beetle-pathogen complex also poses a threat to commercial avocado production in the U.S., Central and South America as well as to valuable other Persea spp. and related plants (Laureacea) that are known hosts. As an addition here, 10 years of the spring appearances (Fig.1) of X. crassiusculus in North Florida is offered for future comparisons. A second unusual appearance is the finding and working with UV mulch and ethanol, as a surprising attraction of X. crassiusculus and other ambrosia beetles including X. glabratus. It was also found that the ambrosia beetles do not respond to yellow and green as expected by most. Also, adding burlap was found to be attractive (increases dead and dying appearing trees) as is silver metallic like UV mulch, while camouflage (camo) was found to work like yellow and green. These occurrences led to the invention and development of UV mulch with new traps to better monitor ambrosia beetles. New traps led to new uses for yellow, green and camo to monitor and decrease damage and losses from ambrosia beetles. The data are presented as evaluated and appear in the figures, discussion and a supplemental section. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=139 SRC="FIGDIR/small/733798v1_fig1.gif" ALT="Figure 1"> View larger version (30K): org.highwire.dtl.DTLVardef@1006101org.highwire.dtl.DTLVardef@1e0a3d6org.highwire.dtl.DTLVardef@1244d1borg.highwire.dtl.DTLVardef@423cb7_HPS_FORMAT_FIGEXP M_FIG O_FLOATNOFigure 1:C_FLOATNO Relative timing of annual emergence of Xylosandrus crassiusculus in north Florida. Collected over 10 years using 5 Baker traps with a 10% ethanol/water solution. Data are from years as marked. Note: data from year 2003 was not collected. C_FIG
Hoyt, B. K.; Salas, S.; Crane, J. H.; Urrutia, M. N.; Gazis, R.; Cano, L. M.; Adhikari, A.; Tian, M.; Jifon, J.; Goenaga, R.; Serrato-Diaz, L. M.; Adaskaveg, J. E.; Manosalva, P. M.
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Phytophthora cinnamomi, the causal agent of Phytophthora root rot (PRR), poses a persistent threat to the United States avocado industry, the top domestic producer and consumer. Avocado growers are facing clonal A2 P. cinnamomi populations challenging their current PRR control methods. In this study, we characterized 125 isolates collected from orchards in California, Florida, Hawaii, Texas, and Puerto Rico for radial growth per day, optimal growth temperature, in vitro fungicide sensitivity, and virulence on DAnjou pear fruit and UC2001 avocado seedlings. Across all isolates, optimal growth occurred most frequently at a range from 22 to 25{degrees}C; however, a subset of isolates from Hawaii, Florida, and California exhibited higher optimal growth temperatures (28{degrees}C and 30{degrees}C) suggesting thermal adaptation in warmer regions. Potassium phosphite EC50 values spanned from 4.61 to 763.13 {micro}g/ml, with significantly higher insensitivity in isolates from California and Florida, reflecting the continued overuse of this fungicide in these major production states. In contrast, baseline sensitivities to ethaboxam, mandipropamid, mefenoxam, fluopicolide, and oxathiapiprolin were uniformly high, with narrow, unimodal EC50 distributions across states. Finally, a wide range of virulence among isolates was detected using avocado seedlings and DAnjou pear fruits with isolates from California and Puerto Rico being the most virulent. Together, this data documents extensive phenotypic diversity within clonal A2 P. cinnamomi populations including heat-adapted and phosphite-insensitive lineages, establishes multi-state fungicide sensitivity baselines, and underscores the need for continued surveillance, integrated fungicide stewardship (especially phosphonates), and rootstock screening against phenotypically diverse populations to sustain avocado PRR management and ensure the United States avocado industry sustainability and profitability.
Herinckx, P.; Delhaye, G.; Bidartondo, M. I.; Gargiulo, R.; Ghaffar, E.; Ruhmann, C.; Ticehurst, M.; Andrews, C.; Apuhtin, V.; Lewis, C.; Merilä, P.; Vanguelova, E.; Verstraeten, A.; Wambsganss, J.; Drouet, T.; Suz, L. M.
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Atmospheric inorganic nitrogen (N) deposition has been linked to increased tree phosphorus (P) deficiency and shifts in ectomycorrhizal (ECM) fungal community composition across Europe, but the underlying mechanisms remain poorly understood due to the scarcity of species-level studies of fungal physiology at large spatial scales. Here, we characterized ECM communities in nine Scots pine (Pinus sylvestris L.) stands across Europes largest N deposition gradient to gain mechanistic insight into N-driven ECM community shifts, by assessing morpho-physiological traits (i.e. soil exploration types and ECM root-tip level exoenzyme activities involved in organic N and P acquisition) on individual ectomycorrhizas. Our data revealed high functional variation in foraging strategies across species and sites, including within dominant ECM genera (Cortinarius, Elaphomyces, Lactarius, Piloderma, Russula). Shifts in community-level exoenzyme activities along the N deposition gradient were consistent with increasing P limitation, with a buffering effect of phosphomonoesterase activity on host nutritional status (i.e. reduced foliar N:P). These trends were mainly driven by interspecific differences in enzymatic profiles and species turnover along the gradient, rather than intraspecific variation within widespread species. Dominant low-biomass species in high N sites (e.g. E. citrinopapillatus, L. subdulcis, R. ochroleuca) were efficient P-foragers, with some displaying high oxidative activity, potentially hampering soil carbon storage under elevated N loads. These findings highlight the role of ECM species-specific traits in mediating ecosystem processes and can help understand the future of pine forests under chronic N pollution, with potential implications for applied forestry.
Chen, W.; Chen, S.; Jia, L.; Zhou, Y.; Shao, Y.; Chen, F.
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Monascus spp. are economically important filamentous fungi that have been utilized in the production of beneficial metabolites such as Monascus pigments and monacolin K, as well as in the brewing of some Asian fermented foods. The delimitation of Monascus species has traditionally relied on phenotypic traits; however, this morphological classification approach is susceptible to subjective judgments and variations in cultural conditions and also may not necessarily be related to the actual genetic relationship. Consequently, synonymy and misidentification frequently occur in Monascus taxonomy, highlighting the urgent need for a convenient and reliable classification system for this genus. In this study, a phylogenetic analysis of 82 representative Monascus strains, encompassing all previously recognized species of the genus, was conducted based on the concordance of five gene genealogies (BenA, CaM, ITS, LSU, and RPB2) to clarify species delimitation and resolve phylogenetic relationships within Monascus. The results revealed that the genus Monascus is resolved into 11 species, which are clustered into two sections: Floridani (including M. argentinensis, M. flavipigmentosus, M. floridanus, M. lunisporas, M. mellicola, M. pallens, and M. recifensis) and Rubri (including M. pilosus, M. purpureus, M. ruber, and M. sanguineus). M. pilosus and M. sanguineus were reaffirmed as distinct species due to their well-supported and divergent phylogenetic lineages. Additionally, M. albidulus, M. anka, M. barkeri, and M. fumeus are synonymized with M. pilosus, while M. aurantiacus and M. rutilus are synonyms of M. purpureus. Finally, a comprehensive list of accepted Monascus species along with their corresponding barcode sequence data is provided.
Banos Quintana, A. P.; Santiago-Padilla, L. M.; Reichelt, M.; Sun, R.; Kaltenpoth, M.; Gershenzon, J.; Lehenberger, M.
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The Eurasian spruce bark beetle Ips typographus, a major forest pest on Norway spruce (Picea abies), forms intimate associations with several types of microbial symbionts. While previous research has focused primarily on filamentous fungi, yeasts have remained largely unexplored. Here, we show that yeasts associated with I. typographus may contribute to host tree colonization by providing defensive benefits. Dominant yeasts (Yamadazyma, Kuraishia, Nakazawaea, and Wickerhamomyces), which are phylogenetically related to other insect-associated Saccharomycotina, significantly attract adult beetles. Moreover, several yeasts inhibit the growth of the pathogenic fungus Trichoderma harzianum in vitro, and beetle eggs benefit from the presence of Kuraishia capsulata by reduced fungal infection under semi-natural conditions. Strikingly, these effects are mediated by the yeasts' transformation of the tree's defensive stilbene glycosides into antimicrobial aglycones and phenolic acids that accumulate in beetle galleries. These findings reveal a previously unrecognized role of symbiotic yeasts in converting spruce defensive stilbene glycosides into antimicrobial aglycones and oxidative cleavage products that accumulate in beetle galleries, and might contribute to the survival of their bark beetle host.
Grossman, N. T.; Casadevall, A.
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IntroductionLomentospora prolificans is a pathogenic filamentous fungus that causes disease primarily in people with severely compromised immune systems. It is pan-resistant to antifungal drugs, but the mechanism of its resistance to amphotericin B (AMB) is unknown. ObjectivesWe aimed to investigate the mechanism of resistance to AMB of L. prolificans. MethodsThe AMB susceptibility of L. prolificans protoplasts was measured using broth microdilution. L. prolificans, either intact, homogenized or fractionated was incubated with AMB in broth. The same activity was carried out with Aspergillus fumigatus as a control. This broth was then used to prepare microdilution plates with Saccharomyces cerevisiae to determine the activity of the conditioned AMB. ResultsAMB was 16-fold more effective in inhibiting the growth of L. prolificans protoplasts than conidia, but only two-fold more effective against A. fumigatus protoplasts than conidia. Incubation of L. prolificans hyphae with AMB in media diminished drug activity to a much greater extent than A. fumigatus, with 8-fold greater fungal mass of the latter required to achieve the effect of the former. Homogenization and fractionization of L. prolificans revealed that the factor inhibiting AMB activity was soluble with a mass >100 kda. DNase, trypsin, proteinase K, amyloglucosidase, SDS and 0.22 m had no effect on the AMB resistance factor, while treatment with urea, acetonitrile inactivated it. ConclusionWe report a different mechanism for AMB resistance based on the existence of a substance residing in the L. prolificans cell wall that can eliminate the antifungal activity of AMB.
Perry, A.; Moore, B.; Jones, S.; Kaur, S.; Crampton, B.; Gurung, A.; Stockan, J. A.; Cottrell, J. E.; Beaton, J. K.; Cavers, S.
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Longitudinal data on disease susceptibility in forest trees are rare but essential for understanding host-pathogen dynamics and genetic variation in susceptibility traits. We present a long-term multisite common garden dataset quantifying susceptibility of Scots pine (Pinus sylvestris) to Dothistroma needle blight. The dataset comprises annual disease assessments collected from the same trees across 11 years, spanning 168 families and 21 Scottish provenances. This design enables partitioning of genetic and environmental sources of variation, evaluation of temporal stability in host response, and estimation of variance components and narrow-sense heritability of susceptibility. The data support analyses of phenotypic plasticity, provenance-level responses, and interactions between disease susceptibility and other adaptive traits. This resource will facilitate predictive modelling of host susceptibility under current and future environmental conditions.
Weiss, E. L.; Banfield, J. F.
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High-severity wildfires of increasing size and frequency result in release of carbon dioxide and loss of timber resources, reduction in biodiversity, loss of soil, diminished water quality, and reduced recreational opportunities. Forest recovery strongly depends on the reestablishment of soil microbial communities, motivating research on how restoration of soil microbiomes in burned forests can be accelerated. Here, we used a high intensity burn pile experiment to test the effectiveness of post-fire native soil amendment. This design enabled us to sequentially and simultaneously sample unburned, burned, and inoculated burned soils while holding post-fire abiotic factors constant. All conditions were sampled at six time points across an annual hydrological cycle and analyzed using 16S and ITS rRNA amplicon sequencing, genome resolved metagenomics, metatranscriptomics, and soil chemistry. Fire sharply reduced bacterial and fungal diversity and eliminated ectomycorrhizal and ericoid symbiotic fungi. Inoculating the burned soil with native microbes accelerated recovery of microbial diversity and of functions associated with nutrient cycling, especially nitrogen transformations. Despite introducing the full diversity of soil microbes from adjacent unburned forest, only a small subset of adapted organisms were engrafted. Native soil inoculation stimulated reestablishment of mycorrhizal fungi, including genera that form essential symbioses with conifers, although this response was not persistent over the full year. Nonetheless, reestablishment of mycorrhizal fungi for even a window of time may facilitate early forest regrowth. We conclude that, by microbial inoculation, recovery that would otherwise rely on dispersal from distant sites is accelerated, potentially enhancing reforestation efforts.
Hammer, R. A.; Lee, M. R.; Yang, N.; Kan, M.; Luecke, N.; Wilson, M.; Stuart, R. K.; Hawkes, C. V.
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Plant roots are broadly colonized by endophytic fungi with saprotrophic capabilities, but our understanding of whether they function in ways that are beneficial or detrimental to the host remains limited to model organisms. We hypothesized that endophytic fungi broadly affect plant access to soil nutrients, particularly organic forms that are typically not directly available to the plant. To address this, we paired 41 fungal endophytes with switchgrass (Panicum virgatum L.) and provided either inorganic or organic forms of nitrogen (N) and phosphorus (P). We evaluated how the fungi affected plant tissue N and P as well as plant growth. We also examined if these outcomes could be predicted from fungal phylogenetic relationships, in vitro traits of the fungi, or characteristics of the habitat from which fungi were isolated. There was substantial variation in both plant N (0.05-0.63%) and P (0.02-0.10%) acquisition that depended on the interaction of fungus and nutrient treatment. More fungi were beneficial for plant N than for P and shoot nutrients generally increased more than root nutrients from fungal associations. However, fungal effects on plant nutrients were not predicted by fungal traits, habitat traits, or fungal phylogenetic relationships. This unpredictability highlights a key challenge for incorporating endophytes into nutrient management strategies. Improving our ability to predict endophyte impacts on host nutrient acquisition will require identifying the mechanisms underlying observed beneficial effects and scaling up to realistic, diverse root microbial communities.
Sapes, G.; DuPre, M. E.; Goke, A.; Koide, R.; Bullington, L.; Sala, A.; Lekberg, Y.
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How plants allocate carbon determines their productivity, responses to stress, and interactions with other organisms. A substantial amount of plant carbon is stored as non-structural carbohydrates (NSC), which sustain turgor via osmoregulation and fuel metabolism when carbon is limited. NSC also support root-colonizing mycorrhizal fungi, thus we hypothesized that under carbon-limiting conditions such as drought, a trade-off between feeding mycorrhizal fungi and maintaining turgor may arise. We reduced carbon allocation to ectomycorrhizal (EcM) networks by girdling Pinus ponderosa trees exposed to drought or ambient conditions and manipulated putative fungal connections between trees by trenching. We show that, in droughted plots, trees putatively connected to girdled trees by EcM networks had 33 % less needle NSC and >10% less turgor than those connected to ungirdled trees. Trees disconnected from the mycorrhizal network by trenching had increased NSC likely from the increased water availability with girdling, but these gains were offset in the presence of networks. Our results demonstrate that the increased carbon demand by EcM fungi in response to reduced carbon inputs from some trees can deplete NSC in neighboring trees via shared mycorrhizal networks. At least in the short term, allocation trade-offs under carbon-limiting conditions may expose networked trees to carbon deficits. This may increase vulnerability to drought, which may be particularly acute given shifts in climate.
Madsen, P. B.; Hensen, N.; Orsucci, M.; Johannesson, H.
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Background: Human activities such as mining generally lead to increased heavy metal concentrations in the environment. While traditional remediation techniques are often costly, the use of fungi as bioremediators, known as mycoremediation, is increasingly gaining attention as a sustainable approach for removal of heavy metals. Here, we evaluated heavy metal levels inside the Kiirunavaara iron ore mine in Northern Sweden and analysed fungal responses to various metal concentrations by comparing growth and metal uptake in mine-derived isolates and closely related control isolates. Results: Sediments inside the mine were enriched in heavy metals compared to those from the outlet of the mine to natural lakes. Six Fusarium isolates were recovered from contaminated mining environments: five isolates from inside the mine were identified as Fusarium oxysporum, and one isolate from the outlet was identified as Fusarium tricinctum. Isolates from the mine and outlet showed overall higher survival and biomass production in presence of copper, iron, and zinc across a range of concentrations (up to 1000 mg/L) compared to control isolates. At the same time, these isolates often exhibited reduced relative metal uptake. As a result, mycoremediation potential, assessed as total uptake in the grown mycelium, was isolate-dependent. Conclusions: Based on these results, we conclude that Fusarium isolates from the Kiirunavaara mine show increased growth in media enriched with heavy metals compared to closely related control isolates. We additionally show that mycoremediation potential is not necessarily associated with environmental origin. Instead, mycoremediation potential should be evaluated on a case-by-case basis for each isolate and based on specific needs for mycoremediation.